Water and Biomolecular Interactions Practice Quiz (10 questions)

All questions and answers

1. At 25°C, a salt is placed in a medium with a dielectric constant of 24.3 rather than water. Which statements correctly describe the comparison?

Hexane’s dielectric constant is 24.3, whereas ethanol’s value is 1.9 at 25°C.
Ethanol has a dielectric constant of 24.3, while water’s value is 78.5 at 25°C.
Water’s high dielectric constant prevents it from dissolving large quantities of salts.
Water’s dielectric constant of 78.5 reduces attraction between charged particles more than ethanol’s.
Water’s lower dielectric constant than ethanol strengthens attraction between dissolved ions.

Ethanol has a dielectric constant of 24.3, while water’s value is 78.5 at 25°C. · Water’s dielectric constant of 78.5 reduces attraction between charged particles more than ethanol’s.

Explanation

At 25°C, water’s dielectric constant is 78.5 and ethanol’s is 24.3; the higher value reduces attraction between charged particles more. Hexane’s value is 1.9, and water’s high dielectric constant enables it to dissolve large quantities of salts.

2. A liquid contains water molecules forming hydrogen bonds. Which statements correctly describe these bonds?

Water’s hydrogen bonds have a half-life of a few picoseconds and are transient.
Rupturing a water hydrogen bond requires about 4.5 kcal/mol, more than rupturing a covalent O—H bond.
A partially unshielded hydrogen attached to nitrogen can interact with a lone pair on oxygen.
A hydrogen bond can involve an unshielded hydrogen attached to oxygen and a lone pair on nitrogen.
Each liquid-water molecule associates through hydrogen bonds with an average of 3.5 others.

Water’s hydrogen bonds have a half-life of a few picoseconds and are transient. · A partially unshielded hydrogen attached to nitrogen can interact with a lone pair on oxygen. · A hydrogen bond can involve an unshielded hydrogen attached to oxygen and a lone pair on nitrogen. · Each liquid-water molecule associates through hydrogen bonds with an average of 3.5 others.

Explanation

Hydrogen bonding involves a partially unshielded hydrogen covalently attached to oxygen or nitrogen interacting with a lone pair on another oxygen or nitrogen. Liquid-water molecules associate with an average of 3.5 others, and the bonds are transient with a half-life of a few picoseconds; rupture requires about 4.5 kcal/mol, less than 5% of the energy needed to break a covalent O—H bond.

3. A chemist compares the hydrogen-bonding roles of several functional groups and the properties of water. Which statements are correct?

Aldehyde oxygen atoms can accept hydrogen bonds through their unshared electron pairs.
Alcohols can donate hydrogen bonds but cannot accept them through oxygen atoms.
Amines can accept hydrogen bonds but cannot donate them through hydrogen atoms.
Hydrogen bonding contributes to water’s relatively high boiling point.
Hydrogen bonding contributes to water’s relatively high viscosity and surface tension.

Aldehyde oxygen atoms can accept hydrogen bonds through their unshared electron pairs. · Hydrogen bonding contributes to water’s relatively high boiling point. · Hydrogen bonding contributes to water’s relatively high viscosity and surface tension.

Explanation

Hydrogen bonding contributes to water’s relatively high viscosity, surface tension, and boiling point. Aldehydes can accept hydrogen bonds through oxygen lone pairs; alcohols and amines can both donate and accept hydrogen bonds, so the latter two statements misstate their roles.

4. What is a hydrophobic interaction in an aqueous environment?

The tendency of charged compounds to cluster and exclude water from their surfaces
The tendency of nonpolar compounds to associate, reducing disruption of favorable interactions among surrounding water molecules
The formation of hydrogen bonds between polar groups and nearby water molecules
The attraction between oppositely charged groups that stabilizes biomolecules in water

The tendency of nonpolar compounds to associate, reducing disruption of favorable interactions among surrounding water molecules

Explanation

Hydrophobic interactions describe nonpolar compounds associating in water, which reduces disruption of favorable water–water interactions. Attraction between oppositely charged groups is a salt bridge, not a hydrophobic interaction.

5. What structural arrangement is favored when a protein folds in an aqueous environment?

Hydrophobic and polar side chains are distributed evenly between the interior and surface.
Polar side chains are buried inside, while hydrophobic side chains face the water.
Hydrophobic side chains are buried inside, while polar or charged side chains face the water.
Charged side chains cluster inside, while hydrophobic side chains form the water-contacting surface.

Hydrophobic side chains are buried inside, while polar or charged side chains face the water.

Explanation

In water, proteins tend to bury hydrophobic amino-acid side chains and expose charged or polar side chains on their surfaces. The reverse arrangement would expose nonpolar groups to water and bury groups that interact favorably with it.

6. What role do van der Waals interactions between stacked nucleotide bases play in the DNA double helix?

They repel negatively charged phosphates to keep the DNA backbone extended.
They pair complementary bases through specific hydrogen-bond donor and acceptor patterns.
They contribute to stabilizing the double helix through attractions between stacked purine and pyrimidine bases.
They form covalent links that hold the two DNA strands together along their length.

They contribute to stabilizing the double helix through attractions between stacked purine and pyrimidine bases.

Explanation

Van der Waals interactions between stacked purine and pyrimidine bases help stabilize the DNA double helix. Hydrogen bonds, rather than van der Waals forces, provide the specific interactions between paired bases.

7. How do proteases and nucleases differ in the hydrolysis they catalyze?

Proteases hydrolyze ester bonds in lipids, whereas nucleases hydrolyze glycoside bonds in carbohydrates.
Proteases hydrolyze phosphoester bonds in DNA and RNA, whereas nucleases hydrolyze proteins into amino acids.
Proteases transfer phosphate groups to proteins, whereas nucleases transfer glucosyl groups to nucleic acids.
Proteases hydrolyze proteins into amino acids, whereas nucleases hydrolyze phosphoester bonds in DNA and RNA.

Proteases hydrolyze proteins into amino acids, whereas nucleases hydrolyze phosphoester bonds in DNA and RNA.

Explanation

Proteases catalyze protein hydrolysis into component amino acids, while nucleases catalyze hydrolysis of phosphoester bonds in DNA and RNA. The reverse pairing is incorrect because it assigns each enzyme’s substrate to the other enzyme.

8. Why can coupling an energetically unfavorable group-transfer reaction to ATP hydrolysis promote biopolymer synthesis?

The enzyme lowers the equilibrium point by accelerating the group-transfer reaction.
ATP hydrolysis raises the equilibrium free-energy requirement for the group-transfer reaction.
ATP hydrolysis prevents the group-transfer reaction from approaching equilibrium.
The favorable free-energy change from ATP hydrolysis can make the combined reaction thermodynamically favorable.

The favorable free-energy change from ATP hydrolysis can make the combined reaction thermodynamically favorable.

Explanation

The favorable free-energy change of ATP hydrolysis can offset the unfavorable transfer, so the coupled reaction favors synthesis overall. Enzymes can accelerate approach to equilibrium, but they do not determine the equilibrium point.

9. When representing water ionization in a chemical model, which products should be included to show the proton transfer between two water molecules?

A hydroxide ion and an oxygen atom
A hydrogen ion and a peroxide ion
A hydronium ion and a hydroxide ion
A hydronium ion and a hydrogen peroxide molecule

A hydronium ion and a hydroxide ion

Explanation

One water molecule transfers a proton to another, producing hydronium and hydroxide ions. A free hydrogen ion is not the product shown because the proton is accepted by another water molecule.

10. Which geometric feature contributes to water’s molecular dipole?

Its two hydrogen atoms form an angle of about 105° around the oxygen atom.
Its oxygen and hydrogen atoms lie in a symmetrical tetrahedral arrangement.
Its oxygen atom forms a right angle with the two hydrogen atoms.
Its two hydrogen atoms form a linear arrangement around the oxygen atom.

Its two hydrogen atoms form an angle of about 105° around the oxygen atom.

Explanation

Water has a slightly skewed tetrahedral geometry, with oxygen at the center and a hydrogen–oxygen–hydrogen angle of about 105°, contributing to its asymmetric charge distribution. A linear arrangement would not describe the stated geometry.

Study with flashcards

Lock in the answers with 10 flashcards on Water and Biomolecular Interactions.

What angle separates the hydrogen atoms in a water molecule?

105°.

What is a dipole?

A molecule with electrical charge distributed asymmetrically across its structure.

What accepts a hydrogen bond from a partially unshielded hydrogen in water’s hydrogen-bond definition?

An unshared electron pair on another oxygen or nitrogen atom.

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